When importing a QIF into CheckBook, you have the option to select where certain fields get imported using the Import Options. So, if your Payees are in the file, you can try a different configuration for the Import Options to try to get them in the To/From field where they belong.
To do this, just click on those menu buttons at the bottom of the Import Options window and change around the field designations. Then, check out the Import Preview to see if everything goes where it should. If it doesn't, click the Go Back button and try something else.
If that doesn't seem to do it, feel free to send us a sample of your QIF file to
support@splasm.com--the sample can be just a few transactions. Once we have a look at it, we should be able tell you exactly how to set the Import Options to get your data imported how you want it.
Thanks!